STRINGSTRING
JQMD01000002_gene1073 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1073" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1073annotation not available (210 aa)    
Predicted Functional Partners:
JQMD01000002_gene1074
annotation not available (152 aa)
 
          0.705
JQMD01000002_gene1958
annotation not available (126 aa)
 
     
  0.578
JQMD01000002_gene2902
annotation not available (288 aa)
   
          0.567
JQMD01000002_gene1072
annotation not available (357 aa)
              0.533
JQMD01000002_gene1512
annotation not available (264 aa)
   
          0.511
JQMD01000002_gene3099
annotation not available (126 aa)
   
          0.503
JQMD01000002_gene3682
annotation not available (207 aa)
   
          0.485
serC
Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine (354 aa)
              0.479
JQMD01000002_gene3545
annotation not available (113 aa)
   
          0.449
JQMD01000002_gene2607
annotation not available (137 aa)
   
          0.447
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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