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JQMD01000002_gene1078 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1078" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1078annotation not available (294 aa)    
Predicted Functional Partners:
JQMD01000002_gene1080
annotation not available (406 aa)
              0.768
JQMD01000002_gene1079
annotation not available (163 aa)
              0.768
JQMD01000002_gene2661
annotation not available (453 aa)
   
 
    0.755
JQMD01000002_gene2641
annotation not available (251 aa)
 
        0.696
JQMD01000002_gene762
annotation not available (318 aa)
   
   
    0.671
JQMD01000002_gene2655
annotation not available (448 aa)
   
          0.638
JQMD01000002_gene2648
annotation not available (266 aa)
   
          0.628
JQMD01000002_gene2656
annotation not available (526 aa)
 
          0.606
JQMD01000002_gene2654
annotation not available (257 aa)
 
        0.570
JQMD01000002_gene2639
annotation not available (225 aa)
 
          0.543
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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