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JQMD01000002_gene1081 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1081" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1081annotation not available (101 aa)    
Predicted Functional Partners:
JQMD01000002_gene1082
annotation not available (199 aa)
              0.702
JQMD01000002_gene2928
annotation not available (378 aa)
   
          0.631
JQMD01000002_gene542
annotation not available (209 aa)
   
          0.551
JQMD01000002_gene1016
annotation not available (172 aa)
   
          0.544
JQMD01000002_gene1954
annotation not available (110 aa)
   
          0.541
JQMD01000002_gene4031
annotation not available (143 aa)
   
          0.530
JQMD01000002_gene524
annotation not available (157 aa)
   
          0.524
JQMD01000002_gene3770
annotation not available (212 aa)
   
          0.516
JQMD01000002_gene2778
annotation not available (140 aa)
   
          0.513
JQMD01000002_gene3833
annotation not available (274 aa)
   
          0.499
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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