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JQMD01000002_gene1102 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1102" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1102annotation not available (138 aa)    
Predicted Functional Partners:
JQMD01000002_gene1138
annotation not available (295 aa)
   
          0.775
JQMD01000002_gene55
annotation not available (96 aa)
   
          0.756
JQMD01000002_gene3542
annotation not available (145 aa)
   
          0.756
JQMD01000002_gene2845
annotation not available (610 aa)
   
          0.754
JQMD01000002_gene3185
annotation not available (281 aa)
   
          0.746
JQMD01000002_gene2850
annotation not available (380 aa)
   
          0.741
JQMD01000002_gene1452
annotation not available (1476 aa)
   
          0.740
JQMD01000002_gene1119
annotation not available (359 aa)
   
          0.737
JQMD01000002_gene3556
annotation not available (243 aa)
   
          0.735
JQMD01000002_gene2856
annotation not available (298 aa)
   
          0.735
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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