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JQMD01000002_gene1105 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1105" - annotation not available in Zobellia uliginosa
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1105annotation not available (151 aa)    
Predicted Functional Partners:
nth
Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3’ to the AP site by a beta-elimination, leaving a 3’-terminal unsaturated sugar and a product with a terminal 5’-phosphate (220 aa)
   
   
  0.736
hemL
annotation not available (426 aa)
            0.701
JQMD01000002_gene998
annotation not available (658 aa)
       
    0.587
JQMD01000002_gene1056
annotation not available (803 aa)
       
    0.587
JQMD01000002_gene722
annotation not available (214 aa)
 
 
  0.489
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (344 aa)
   
   
  0.488
JQMD01000002_gene2733
Iron-sulfur cluster carrier protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP (379 aa)
   
        0.473
rpmI
annotation not available (65 aa)
     
        0.431
JQMD01000002_gene4143
annotation not available (321 aa)
   
        0.408
JQMD01000002_gene2430
annotation not available (265 aa)
     
        0.407
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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