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JQMD01000002_gene1122 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1122" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1122annotation not available (347 aa)    
Predicted Functional Partners:
JQMD01000002_gene2306
annotation not available (1128 aa)
   
 
  0.904
JQMD01000002_gene2888
annotation not available (384 aa)
  0.901
JQMD01000002_gene831
annotation not available (264 aa)
 
 
  0.884
JQMD01000002_gene2307
annotation not available (424 aa)
   
  0.832
JQMD01000002_gene2291
annotation not available (696 aa)
   
 
  0.814
JQMD01000002_gene4328
annotation not available (731 aa)
   
  0.809
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine (438 aa)
 
 
  0.805
JQMD01000002_gene3419
annotation not available (206 aa)
     
  0.795
JQMD01000002_gene1172
annotation not available (391 aa)
  0.790
trpB
Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine (394 aa)
   
   
  0.783
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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