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JQMD01000002_gene1125 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1125" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1125annotation not available (147 aa)    
Predicted Functional Partners:
JQMD01000002_gene1124
annotation not available (108 aa)
              0.708
JQMD01000002_gene1390
annotation not available (70 aa)
   
          0.549
JQMD01000002_gene4120
annotation not available (134 aa)
 
 
0.515
JQMD01000002_gene1123
annotation not available (688 aa)
              0.486
JQMD01000002_gene1391
annotation not available (434 aa)
 
          0.469
JQMD01000002_gene1389
annotation not available (298 aa)
 
          0.458
JQMD01000002_gene4121
annotation not available (318 aa)
 
          0.452
JQMD01000002_gene4288
annotation not available (669 aa)
   
          0.436
JQMD01000002_gene902
annotation not available (229 aa)
   
 
  0.418
JQMD01000002_gene721
annotation not available (104 aa)
   
 
  0.418
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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