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JQMD01000002_gene1153 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1153" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1153annotation not available (276 aa)    
Predicted Functional Partners:
JQMD01000002_gene1154
annotation not available (112 aa)
              0.664
JQMD01000002_gene1155
annotation not available (586 aa)
              0.657
JQMD01000002_gene769
annotation not available (354 aa)
       
    0.530
JQMD01000002_gene1944
annotation not available (386 aa)
       
    0.530
JQMD01000002_gene1151
annotation not available (302 aa)
              0.526
JQMD01000002_gene1152
annotation not available (199 aa)
              0.483
JQMD01000002_gene1156
annotation not available (371 aa)
              0.475
JQMD01000002_gene1157
annotation not available (141 aa)
              0.469
JQMD01000002_gene1150
annotation not available (250 aa)
              0.429
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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