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JQMD01000002_gene1160 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1160" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1160annotation not available (129 aa)    
Predicted Functional Partners:
JQMD01000002_gene1158
annotation not available (214 aa)
              0.846
JQMD01000002_gene1159
annotation not available (192 aa)
              0.845
JQMD01000002_gene227
annotation not available (329 aa)
   
  0.716
JQMD01000002_gene1015
annotation not available (969 aa)
   
 
  0.677
JQMD01000002_gene2566
annotation not available (703 aa)
       
  0.669
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP (510 aa)
   
    0.637
JQMD01000002_gene1157
annotation not available (141 aa)
   
        0.614
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family (380 aa)
       
    0.611
JQMD01000002_gene2357
annotation not available (1502 aa)
       
    0.609
JQMD01000002_gene1156
annotation not available (371 aa)
              0.608
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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