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JQMD01000002_gene1164 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1164" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1164annotation not available (335 aa)    
Predicted Functional Partners:
JQMD01000002_gene1163
annotation not available (416 aa)
 
   
  0.970
JQMD01000002_gene1165
annotation not available (528 aa)
 
  0.951
JQMD01000002_gene1166
annotation not available (312 aa)
 
   
  0.920
JQMD01000002_gene922
annotation not available (315 aa)
 
   
  0.857
JQMD01000002_gene213
annotation not available (524 aa)
 
  0.798
JQMD01000002_gene3803
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline (271 aa)
         
  0.766
JQMD01000002_gene2666
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline (266 aa)
         
  0.766
JQMD01000002_gene770
annotation not available (388 aa)
       
  0.635
JQMD01000002_gene2975
annotation not available (213 aa)
       
    0.578
JQMD01000002_gene1260
annotation not available (486 aa)
         
  0.578
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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