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JQMD01000002_gene1189 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1189" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1189annotation not available (181 aa)    
Predicted Functional Partners:
JQMD01000002_gene1188
annotation not available (315 aa)
              0.889
JQMD01000002_gene1187
annotation not available (193 aa)
              0.802
JQMD01000002_gene1186
annotation not available (175 aa)
              0.802
JQMD01000002_gene1185
annotation not available (254 aa)
              0.802
JQMD01000002_gene1190
annotation not available (841 aa)
   
        0.652
JQMD01000002_gene3723
annotation not available (229 aa)
   
          0.596
JQMD01000002_gene1489
annotation not available (181 aa)
   
          0.545
JQMD01000002_gene3146
annotation not available (116 aa)
   
          0.531
JQMD01000002_gene3830
annotation not available (175 aa)
   
          0.514
JQMD01000002_gene2850
annotation not available (380 aa)
   
          0.491
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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