STRINGSTRING
JQMD01000002_gene1200 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1200" - annotation not available in Zobellia uliginosa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1200annotation not available (230 aa)    
Predicted Functional Partners:
JQMD01000002_gene1201
annotation not available (436 aa)
 
          0.905
JQMD01000002_gene1199
annotation not available (165 aa)
              0.875
JQMD01000002_gene447
annotation not available (801 aa)
   
  0.635
fabZ
Multifunctional fusion protein; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily (461 aa)
   
  0.624
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family (961 aa)
       
  0.586
JQMD01000002_gene1198
annotation not available (429 aa)
              0.552
JQMD01000002_gene2056
annotation not available (219 aa)
 
          0.541
JQMD01000002_gene998
annotation not available (658 aa)
     
  0.517
JQMD01000002_gene1056
annotation not available (803 aa)
     
  0.517
JQMD01000002_gene2067
annotation not available (92 aa)
 
          0.510
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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