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JQMD01000002_gene1201 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1201" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1201annotation not available (436 aa)    
Predicted Functional Partners:
JQMD01000002_gene1200
annotation not available (230 aa)
 
          0.905
JQMD01000002_gene1199
annotation not available (165 aa)
 
          0.890
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (946 aa)
   
   
  0.651
JQMD01000002_gene4278
annotation not available (279 aa)
 
   
  0.580
JQMD01000002_gene4279
annotation not available (485 aa)
 
        0.566
JQMD01000002_gene1198
annotation not available (429 aa)
              0.552
JQMD01000002_gene1006
annotation not available (221 aa)
 
 
   
  0.518
JQMD01000002_gene853
annotation not available (747 aa)
   
 
 
  0.485
JQMD01000002_gene2922
annotation not available (241 aa)
   
  0.480
recA
Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage (335 aa)
     
 
  0.475
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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