STRINGSTRING
JQMD01000002_gene1215 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1215" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1215annotation not available (484 aa)    
Predicted Functional Partners:
JQMD01000002_gene1216
annotation not available (261 aa)
              0.846
JQMD01000002_gene4209
annotation not available (2618 aa)
   
     
  0.658
JQMD01000002_gene3322
annotation not available (889 aa)
   
   
  0.626
JQMD01000002_gene977
annotation not available (160 aa)
   
          0.593
JQMD01000002_gene2084
annotation not available (1876 aa)
   
     
  0.555
JQMD01000002_gene3640
annotation not available (892 aa)
   
          0.554
JQMD01000002_gene1437
annotation not available (683 aa)
   
          0.526
JQMD01000002_gene845
annotation not available (432 aa)
   
          0.519
JQMD01000002_gene710
annotation not available (647 aa)
   
          0.482
JQMD01000002_gene2390
annotation not available (247 aa)
   
          0.480
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
Server load: low (6%) [HD]