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JQMD01000002_gene1219 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1219" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1219annotation not available (329 aa)    
Predicted Functional Partners:
JQMD01000002_gene447
annotation not available (801 aa)
       
  0.693
JQMD01000002_gene674
annotation not available (484 aa)
   
  0.638
JQMD01000002_gene583
annotation not available (295 aa)
       
  0.628
JQMD01000002_gene1218
annotation not available (375 aa)
              0.622
JQMD01000002_gene998
annotation not available (658 aa)
     
 
  0.613
JQMD01000002_gene1056
annotation not available (803 aa)
     
 
  0.613
JQMD01000002_gene1817
annotation not available (727 aa)
   
    0.613
JQMD01000002_gene1745
annotation not available (701 aa)
   
    0.613
JQMD01000002_gene2917
annotation not available (517 aa)
     
  0.608
JQMD01000002_gene3760
annotation not available (765 aa)
   
 
  0.604
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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