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JQMD01000002_gene1225 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1225" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1225annotation not available (283 aa)    
Predicted Functional Partners:
JQMD01000002_gene1228
annotation not available (278 aa)
 
          0.798
JQMD01000002_gene1227
annotation not available (161 aa)
 
          0.794
JQMD01000002_gene1226
annotation not available (130 aa)
              0.610
JQMD01000002_gene2490
annotation not available (661 aa)
 
 
      0.564
JQMD01000002_gene3466
annotation not available (247 aa)
   
          0.442
JQMD01000002_gene1260
annotation not available (486 aa)
   
 
      0.415
JQMD01000002_gene697
annotation not available (117 aa)
   
          0.412
JQMD01000002_gene2032
annotation not available (262 aa)
   
 
      0.407
JQMD01000002_gene1224
annotation not available (557 aa)
              0.401
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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