STRINGSTRING
JQMD01000002_gene1252 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1252" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1252annotation not available (425 aa)    
Predicted Functional Partners:
JQMD01000002_gene2083
annotation not available (3437 aa)
   
 
  0.860
JQMD01000002_gene3322
annotation not available (889 aa)
 
 
  0.811
JQMD01000002_gene1368
annotation not available (207 aa)
   
          0.747
JQMD01000002_gene2703
annotation not available (400 aa)
 
          0.746
JQMD01000002_gene2704
annotation not available (794 aa)
   
          0.696
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO (206 aa)
     
        0.682
JQMD01000002_gene4209
annotation not available (2618 aa)
 
     
  0.548
JQMD01000002_gene4050
annotation not available (655 aa)
   
          0.521
JQMD01000002_gene2014
annotation not available (184 aa)
   
          0.503
JQMD01000002_gene1251
annotation not available (148 aa)
 
          0.502
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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