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JQMD01000002_gene1253 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1253" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1253annotation not available (211 aa)    
Predicted Functional Partners:
JQMD01000002_gene2084
annotation not available (1876 aa)
 
  0.806
JQMD01000002_gene477
annotation not available (742 aa)
   
  0.711
JQMD01000002_gene942
annotation not available (402 aa)
   
          0.671
JQMD01000002_gene950
annotation not available (652 aa)
   
  0.628
JQMD01000002_gene2496
annotation not available (778 aa)
   
  0.628
JQMD01000002_gene2490
annotation not available (661 aa)
   
  0.625
JQMD01000002_gene3633
annotation not available (1406 aa)
       
  0.617
JQMD01000002_gene1727
annotation not available (1390 aa)
       
  0.608
JQMD01000002_gene712
annotation not available (1345 aa)
       
  0.598
JQMD01000002_gene637
annotation not available (1406 aa)
       
  0.598
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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