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JQMD01000002_gene1276 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1276" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1276annotation not available (612 aa)    
Predicted Functional Partners:
JQMD01000002_gene1278
annotation not available (752 aa)
 
   
    0.906
JQMD01000002_gene2688
annotation not available (767 aa)
 
   
  0.865
JQMD01000002_gene442
annotation not available (736 aa)
   
  0.848
JQMD01000002_gene1275
annotation not available (309 aa)
 
    0.830
JQMD01000002_gene2510
annotation not available (653 aa)
 
   
    0.830
JQMD01000002_gene1721
annotation not available (663 aa)
 
 
  0.796
JQMD01000002_gene1280
annotation not available (519 aa)
 
          0.791
glgB
1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily (632 aa)
 
 
0.780
JQMD01000002_gene1281
annotation not available (987 aa)
 
          0.763
JQMD01000002_gene1279
annotation not available (437 aa)
 
          0.743
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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