STRINGSTRING
JQMD01000002_gene1301 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1301" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1301annotation not available (312 aa)    
Predicted Functional Partners:
JQMD01000002_gene1300
annotation not available (191 aa)
 
      0.876
JQMD01000002_gene3706
annotation not available (183 aa)
   
      0.776
JQMD01000002_gene120
annotation not available (175 aa)
   
      0.745
JQMD01000002_gene1179
annotation not available (187 aa)
 
      0.707
JQMD01000002_gene107
annotation not available (191 aa)
   
      0.702
JQMD01000002_gene1239
annotation not available (200 aa)
   
      0.694
JQMD01000002_gene2481
annotation not available (187 aa)
   
      0.685
JQMD01000002_gene1302
annotation not available (1124 aa)
 
          0.627
JQMD01000002_gene3101
annotation not available (194 aa)
   
      0.607
JQMD01000002_gene1183
annotation not available (191 aa)
   
      0.583
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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