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JQMD01000002_gene1310 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1310" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1310annotation not available (193 aa)    
Predicted Functional Partners:
JQMD01000002_gene2357
annotation not available (1502 aa)
   
 
  0.877
JQMD01000002_gene1309
annotation not available (181 aa)
 
          0.809
JQMD01000002_gene2498
annotation not available (191 aa)
   
          0.736
JQMD01000002_gene220
annotation not available (196 aa)
   
          0.675
JQMD01000002_gene1312
annotation not available (509 aa)
 
          0.661
JQMD01000002_gene1311
annotation not available (162 aa)
              0.606
JQMD01000002_gene447
annotation not available (801 aa)
     
 
  0.546
JQMD01000002_gene1313
annotation not available (239 aa)
              0.531
JQMD01000002_gene1308
annotation not available (130 aa)
              0.467
JQMD01000002_gene2496
annotation not available (778 aa)
   
  0.432
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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