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JQMD01000002_gene1326 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1326" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1326annotation not available (317 aa)    
Predicted Functional Partners:
purC
annotation not available (316 aa)
         
  0.797
JQMD01000002_gene447
annotation not available (801 aa)
   
 
    0.745
JQMD01000002_gene3151
annotation not available (139 aa)
   
 
  0.705
rsfS
Ribosomal silencing factor RsfS; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation (127 aa)
 
          0.696
JQMD01000002_gene2614
annotation not available (641 aa)
 
        0.679
JQMD01000002_gene1327
annotation not available (277 aa)
              0.576
JQMD01000002_gene583
annotation not available (295 aa)
     
 
    0.501
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (946 aa)
 
        0.488
JQMD01000002_gene718
annotation not available (122 aa)
         
  0.484
JQMD01000002_gene1329
annotation not available (554 aa)
              0.481
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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