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JQMD01000002_gene1363 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1363" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1363annotation not available (1026 aa)    
Predicted Functional Partners:
JQMD01000002_gene1364
annotation not available (442 aa)
 
          0.965
JQMD01000002_gene3675
annotation not available (654 aa)
 
  0.710
JQMD01000002_gene2313
annotation not available (234 aa)
 
  0.669
hisI
annotation not available (199 aa)
     
 
    0.656
JQMD01000002_gene1446
annotation not available (451 aa)
   
  0.624
JQMD01000002_gene1365
annotation not available (488 aa)
 
          0.618
JQMD01000002_gene3765
Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins (234 aa)
   
  0.618
JQMD01000002_gene3677
annotation not available (145 aa)
   
  0.618
JQMD01000002_gene3556
annotation not available (243 aa)
   
  0.618
JQMD01000002_gene2351
annotation not available (313 aa)
   
  0.618
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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