STRINGSTRING
JQMD01000002_gene138 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene138" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene138annotation not available (502 aa)    
Predicted Functional Partners:
JQMD01000002_gene211
annotation not available (396 aa)
   
          0.739
JQMD01000002_gene141
annotation not available (897 aa)
 
          0.723
JQMD01000002_gene139
annotation not available (286 aa)
              0.720
JQMD01000002_gene2492
annotation not available (100 aa)
   
          0.694
JQMD01000002_gene2468
annotation not available (1050 aa)
   
          0.670
JQMD01000002_gene140
annotation not available (135 aa)
              0.654
JQMD01000002_gene1087
annotation not available (348 aa)
   
          0.641
JQMD01000002_gene202
annotation not available (961 aa)
   
          0.637
JQMD01000002_gene137
annotation not available (414 aa)
              0.633
JQMD01000002_gene1570
annotation not available (244 aa)
   
          0.626
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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