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JQMD01000002_gene1398 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1398" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1398annotation not available (1380 aa)    
Predicted Functional Partners:
JQMD01000002_gene1396
annotation not available (527 aa)
 
       
0.888
JQMD01000002_gene1397
annotation not available (84 aa)
              0.845
JQMD01000002_gene1434
annotation not available (471 aa)
 
 
  0.814
JQMD01000002_gene1393
annotation not available (236 aa)
 
 
  0.804
JQMD01000002_gene1424
annotation not available (476 aa)
 
 
  0.799
JQMD01000002_gene1399
annotation not available (160 aa)
              0.723
JQMD01000002_gene3760
annotation not available (765 aa)
     
 
    0.617
JQMD01000002_gene4021
annotation not available (583 aa)
   
          0.604
JQMD01000002_gene444
annotation not available (598 aa)
       
  0.579
JQMD01000002_gene2356
annotation not available (380 aa)
       
  0.579
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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