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JQMD01000002_gene1404 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1404" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1404annotation not available (262 aa)    
Predicted Functional Partners:
JQMD01000002_gene1403
annotation not available (785 aa)
 
  0.987
JQMD01000002_gene2551
annotation not available (728 aa)
 
  0.959
JQMD01000002_gene3409
annotation not available (810 aa)
 
  0.940
JQMD01000002_gene1405
annotation not available (643 aa)
 
     
  0.825
JQMD01000002_gene1406
annotation not available (361 aa)
 
     
  0.801
JQMD01000002_gene3407
annotation not available (435 aa)
 
 
  0.715
JQMD01000002_gene2733
Iron-sulfur cluster carrier protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP (379 aa)
   
  0.540
JQMD01000002_gene1339
annotation not available (988 aa)
   
  0.536
JQMD01000002_gene1652
annotation not available (723 aa)
   
  0.533
JQMD01000002_gene1428
annotation not available (203 aa)
 
 
  0.524
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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