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JQMD01000002_gene1414 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1414" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1414annotation not available (384 aa)    
Predicted Functional Partners:
JQMD01000002_gene923
annotation not available (451 aa)
   
          0.764
JQMD01000002_gene294
annotation not available (529 aa)
 
          0.749
JQMD01000002_gene946
annotation not available (273 aa)
   
          0.737
JQMD01000002_gene2552
annotation not available (459 aa)
   
          0.702
JQMD01000002_gene917
annotation not available (325 aa)
   
          0.566
JQMD01000002_gene1669
annotation not available (288 aa)
   
          0.551
JQMD01000002_gene3159
annotation not available (547 aa)
       
  0.549
JQMD01000002_gene875
annotation not available (276 aa)
   
          0.545
JQMD01000002_gene2369
annotation not available (1064 aa)
       
    0.524
JQMD01000002_gene3001
annotation not available (351 aa)
   
          0.494
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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