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JQMD01000002_gene1440 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1440" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1440annotation not available (381 aa)    
Predicted Functional Partners:
JQMD01000002_gene1439
annotation not available (162 aa)
              0.845
JQMD01000002_gene2021
annotation not available (533 aa)
   
     
  0.781
JQMD01000002_gene3301
annotation not available (136 aa)
   
          0.752
JQMD01000002_gene1171
annotation not available (240 aa)
 
        0.720
JQMD01000002_gene442
annotation not available (736 aa)
   
  0.697
JQMD01000002_gene1441
annotation not available (970 aa)
              0.655
JQMD01000002_gene1442
annotation not available (160 aa)
 
          0.646
JQMD01000002_gene3064
annotation not available (447 aa)
   
  0.608
JQMD01000002_gene4157
annotation not available (180 aa)
   
          0.593
JQMD01000002_gene2357
annotation not available (1502 aa)
     
 
  0.586
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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