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JQMD01000002_gene1447 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1447" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1447annotation not available (903 aa)    
Predicted Functional Partners:
JQMD01000002_gene2214
annotation not available (870 aa)
   
 
 
  0.806
JQMD01000002_gene2858
annotation not available (524 aa)
   
          0.779
JQMD01000002_gene3741
annotation not available (1128 aa)
   
          0.778
JQMD01000002_gene1117
annotation not available (818 aa)
   
          0.773
JQMD01000002_gene3828
annotation not available (169 aa)
   
     
  0.772
JQMD01000002_gene2634
annotation not available (428 aa)
   
          0.767
JQMD01000002_gene2599
annotation not available (172 aa)
   
          0.766
JQMD01000002_gene1496
annotation not available (255 aa)
 
          0.761
JQMD01000002_gene1518
annotation not available (573 aa)
 
          0.758
JQMD01000002_gene1452
annotation not available (1476 aa)
   
          0.758
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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