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JQMD01000002_gene1454 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1454" - annotation not available in Zobellia uliginosa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1454annotation not available (235 aa)    
Predicted Functional Partners:
tsaD
tRNA N6-adenosine threonylcarbamoyltransferase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family (351 aa)
   
        0.748
JQMD01000002_gene1452
annotation not available (1476 aa)
              0.614
JQMD01000002_gene2306
annotation not available (1128 aa)
         
  0.600
JQMD01000002_gene1457
annotation not available (370 aa)
 
   
  0.596
rsmH
Ribosomal RNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA (297 aa)
 
   
  0.595
JQMD01000002_gene3063
annotation not available (1176 aa)
     
 
    0.585
JQMD01000002_gene2259
annotation not available (262 aa)
       
    0.583
JQMD01000002_gene1455
annotation not available (215 aa)
              0.576
JQMD01000002_gene4108
annotation not available (278 aa)
 
   
  0.560
rsmI
Ribosomal RNA small subunit methyltransferase I; Catalyzes the 2’-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA (223 aa)
 
   
  0.523
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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