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JQMD01000002_gene1462 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1462" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1462annotation not available (506 aa)    
Predicted Functional Partners:
JQMD01000002_gene1461
annotation not available (1110 aa)
 
          0.835
JQMD01000002_gene1999
annotation not available (1136 aa)
   
          0.746
JQMD01000002_gene1628
annotation not available (1168 aa)
   
          0.671
JQMD01000002_gene371
annotation not available (414 aa)
   
          0.613
JQMD01000002_gene1941
annotation not available (125 aa)
   
          0.604
JQMD01000002_gene4005
annotation not available (585 aa)
   
          0.584
JQMD01000002_gene1459
annotation not available (554 aa)
 
          0.575
JQMD01000002_gene29
annotation not available (743 aa)
   
          0.568
JQMD01000002_gene869
annotation not available (361 aa)
   
          0.547
JQMD01000002_gene202
annotation not available (961 aa)
   
          0.515
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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