STRINGSTRING
JQMD01000002_gene1471 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1471" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1471annotation not available (523 aa)    
Predicted Functional Partners:
JQMD01000002_gene1472
annotation not available (349 aa)
 
   
  0.945
JQMD01000002_gene1470
annotation not available (424 aa)
 
     
  0.906
JQMD01000002_gene2084
annotation not available (1876 aa)
   
 
  0.813
JQMD01000002_gene860
annotation not available (232 aa)
     
  0.806
JQMD01000002_gene4209
annotation not available (2618 aa)
       
    0.780
JQMD01000002_gene3954
annotation not available (438 aa)
   
  0.772
JQMD01000002_gene2085
annotation not available (1484 aa)
       
    0.771
JQMD01000002_gene2414
annotation not available (286 aa)
       
  0.750
JQMD01000002_gene2080
annotation not available (3471 aa)
   
 
    0.742
JQMD01000002_gene222
annotation not available (1154 aa)
   
 
  0.732
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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