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JQMD01000002_gene1483 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1483" - annotation not available in Zobellia uliginosa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1483annotation not available (566 aa)    
Predicted Functional Partners:
JQMD01000002_gene2003
annotation not available (617 aa)
 
 
  0.814
secD
Multifunctional fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily (998 aa)
 
   
  0.807
JQMD01000002_gene3826
annotation not available (870 aa)
 
 
 
  0.759
JQMD01000002_gene1482
annotation not available (223 aa)
 
          0.755
lspA
Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family (215 aa)
 
   
  0.728
JQMD01000002_gene1484
annotation not available (396 aa)
              0.715
JQMD01000002_gene1496
annotation not available (255 aa)
   
        0.701
JQMD01000002_gene2357
annotation not available (1502 aa)
   
   
  0.693
JQMD01000002_gene3108
annotation not available (397 aa)
 
     
  0.683
JQMD01000002_gene541
annotation not available (347 aa)
   
 
    0.667
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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