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JQMD01000002_gene1493 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1493" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1493annotation not available (98 aa)    
Predicted Functional Partners:
JQMD01000002_gene1494
annotation not available (138 aa)
 
          0.912
JQMD01000002_gene1495
annotation not available (359 aa)
         
  0.867
JQMD01000002_gene1496
annotation not available (255 aa)
 
          0.735
JQMD01000002_gene2763
annotation not available (103 aa)
   
          0.707
ribH
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin (160 aa)
              0.642
JQMD01000002_gene1214
annotation not available (127 aa)
   
          0.636
JQMD01000002_gene715
annotation not available (214 aa)
   
          0.628
JQMD01000002_gene581
annotation not available (456 aa)
   
   
    0.618
JQMD01000002_gene1903
annotation not available (324 aa)
 
   
    0.586
JQMD01000002_gene1938
annotation not available (277 aa)
   
          0.578
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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