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JQMD01000002_gene1540 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1540" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1540annotation not available (653 aa)    
Predicted Functional Partners:
JQMD01000002_gene1539
annotation not available (244 aa)
          0.959
JQMD01000002_gene1320
annotation not available (1326 aa)
 
  0.933
JQMD01000002_gene4283
annotation not available (663 aa)
     
  0.890
JQMD01000002_gene2568
annotation not available (131 aa)
 
  0.878
JQMD01000002_gene1757
annotation not available (124 aa)
 
 
  0.831
JQMD01000002_gene2157
annotation not available (745 aa)
 
 
  0.757
JQMD01000002_gene1727
annotation not available (1390 aa)
     
  0.696
JQMD01000002_gene1150
annotation not available (250 aa)
          0.692
JQMD01000002_gene822
annotation not available (497 aa)
     
  0.680
JQMD01000002_gene339
annotation not available (1276 aa)
     
  0.673
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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