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JQMD01000002_gene1600 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1600" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1600annotation not available (597 aa)    
Predicted Functional Partners:
JQMD01000002_gene1601
annotation not available (372 aa)
              0.847
JQMD01000002_gene1602
annotation not available (480 aa)
              0.761
JQMD01000002_gene1715
annotation not available (556 aa)
 
   
    0.739
JQMD01000002_gene964
annotation not available (273 aa)
   
        0.737
JQMD01000002_gene965
annotation not available (219 aa)
 
   
    0.727
JQMD01000002_gene886
annotation not available (266 aa)
 
          0.667
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family (961 aa)
   
 
    0.625
JQMD01000002_gene3748
annotation not available (1054 aa)
         
  0.616
JQMD01000002_gene3238
annotation not available (312 aa)
   
          0.610
JQMD01000002_gene2741
annotation not available (245 aa)
   
          0.606
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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