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JQMD01000002_gene1603 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1603" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1603annotation not available (338 aa)    
Predicted Functional Partners:
JQMD01000002_gene1747
annotation not available (457 aa)
 
 
  0.724
JQMD01000002_gene1819
annotation not available (458 aa)
 
 
  0.723
JQMD01000002_gene1180
annotation not available (603 aa)
   
          0.526
JQMD01000002_gene1605
annotation not available (602 aa)
 
          0.524
JQMD01000002_gene1236
annotation not available (580 aa)
   
          0.512
JQMD01000002_gene323
annotation not available (545 aa)
   
          0.502
JQMD01000002_gene709
annotation not available (549 aa)
   
 
    0.464
JQMD01000002_gene3631
annotation not available (609 aa)
   
          0.463
JQMD01000002_gene190
annotation not available (587 aa)
   
          0.448
JQMD01000002_gene2357
annotation not available (1502 aa)
       
 
  0.447
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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