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JQMD01000002_gene1607 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1607" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1607annotation not available (763 aa)    
Predicted Functional Partners:
JQMD01000002_gene1606
annotation not available (550 aa)
 
          0.865
JQMD01000002_gene1610
annotation not available (763 aa)
 
          0.861
JQMD01000002_gene1609
annotation not available (666 aa)
 
          0.855
JQMD01000002_gene1608
annotation not available (294 aa)
              0.831
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family (961 aa)
       
    0.772
JQMD01000002_gene1613
annotation not available (384 aa)
 
          0.744
JQMD01000002_gene1612
annotation not available (1016 aa)
 
          0.705
JQMD01000002_gene1455
annotation not available (215 aa)
     
 
  0.662
JQMD01000002_gene1589
annotation not available (390 aa)
   
          0.659
JQMD01000002_gene3655
annotation not available (430 aa)
         
  0.652
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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