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JQMD01000002_gene1622 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1622" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1622annotation not available (122 aa)    
Predicted Functional Partners:
JQMD01000002_gene1623
annotation not available (136 aa)
 
          0.790
JQMD01000002_gene773
annotation not available (221 aa)
   
          0.719
JQMD01000002_gene4089
annotation not available (474 aa)
   
          0.605
JQMD01000002_gene4088
annotation not available (587 aa)
   
          0.597
JQMD01000002_gene3213
annotation not available (313 aa)
   
          0.585
JQMD01000002_gene2881
annotation not available (204 aa)
   
          0.582
JQMD01000002_gene414
annotation not available (252 aa)
   
          0.574
JQMD01000002_gene3834
annotation not available (75 aa)
   
          0.566
JQMD01000002_gene421
annotation not available (267 aa)
   
          0.558
JQMD01000002_gene2700
annotation not available (299 aa)
   
          0.558
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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