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JQMD01000002_gene1650 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1650" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1650annotation not available (114 aa)    
Predicted Functional Partners:
JQMD01000002_gene1649
annotation not available (713 aa)
              0.765
JQMD01000002_gene1648
annotation not available (137 aa)
              0.575
JQMD01000002_gene3532
annotation not available (97 aa)
   
          0.542
JQMD01000002_gene1644
annotation not available (149 aa)
 
          0.530
JQMD01000002_gene3535
annotation not available (101 aa)
   
          0.519
JQMD01000002_gene3534
annotation not available (102 aa)
   
          0.508
JQMD01000002_gene3536
annotation not available (102 aa)
   
          0.502
JQMD01000002_gene510
annotation not available (202 aa)
   
          0.493
JQMD01000002_gene1623
annotation not available (136 aa)
   
          0.472
JQMD01000002_gene3533
annotation not available (101 aa)
   
          0.453
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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