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JQMD01000002_gene1654 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1654" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1654annotation not available (449 aa)    
Predicted Functional Partners:
JQMD01000002_gene1653
annotation not available (442 aa)
 
        0.963
JQMD01000002_gene1804
annotation not available (445 aa)
   
        0.777
JQMD01000002_gene1736
annotation not available (445 aa)
   
        0.777
JQMD01000002_gene4167
annotation not available (449 aa)
   
        0.764
JQMD01000002_gene622
annotation not available (488 aa)
   
        0.748
JQMD01000002_gene3298
annotation not available (474 aa)
   
        0.714
JQMD01000002_gene372
annotation not available (446 aa)
   
        0.704
JQMD01000002_gene707
annotation not available (261 aa)
   
          0.681
JQMD01000002_gene3123
annotation not available (264 aa)
   
          0.663
JQMD01000002_gene327
annotation not available (432 aa)
   
        0.649
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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