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JQMD01000002_gene1699 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1699" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1699annotation not available (504 aa)    
Predicted Functional Partners:
JQMD01000002_gene1700
annotation not available (1020 aa)
 
          0.965
JQMD01000002_gene2370
annotation not available (1056 aa)
   
          0.783
JQMD01000002_gene274
annotation not available (538 aa)
   
        0.776
JQMD01000002_gene1177
annotation not available (1136 aa)
   
          0.773
JQMD01000002_gene273
annotation not available (1111 aa)
   
          0.770
JQMD01000002_gene1741
annotation not available (1016 aa)
   
          0.770
JQMD01000002_gene286
annotation not available (733 aa)
   
          0.769
JQMD01000002_gene254
annotation not available (741 aa)
   
          0.766
JQMD01000002_gene245
annotation not available (1122 aa)
   
          0.765
JQMD01000002_gene246
annotation not available (554 aa)
   
        0.764
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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