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JQMD01000002_gene1703 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1703" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1703annotation not available (588 aa)    
Predicted Functional Partners:
JQMD01000002_gene1593
annotation not available (510 aa)
   
   
    0.801
JQMD01000002_gene3125
annotation not available (807 aa)
 
   
    0.702
JQMD01000002_gene1702
annotation not available (531 aa)
 
          0.638
JQMD01000002_gene1706
annotation not available (534 aa)
 
          0.615
JQMD01000002_gene1704
annotation not available (446 aa)
              0.593
JQMD01000002_gene1612
annotation not available (1016 aa)
   
          0.585
JQMD01000002_gene1610
annotation not available (763 aa)
   
          0.527
JQMD01000002_gene1701
annotation not available (470 aa)
              0.511
JQMD01000002_gene678
annotation not available (838 aa)
   
          0.496
JQMD01000002_gene1599
annotation not available (965 aa)
   
          0.493
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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