STRINGSTRING
JQMD01000002_gene1718 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1718" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1718annotation not available (777 aa)    
Predicted Functional Partners:
JQMD01000002_gene1719
annotation not available (933 aa)
 
          0.883
JQMD01000002_gene1717
annotation not available (661 aa)
 
 
      0.862
secD
Multifunctional fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily (998 aa)
         
  0.775
JQMD01000002_gene2506
annotation not available (321 aa)
   
          0.742
JQMD01000002_gene1726
annotation not available (596 aa)
   
 
      0.709
JQMD01000002_gene1721
annotation not available (663 aa)
 
          0.701
JQMD01000002_gene1196
annotation not available (1044 aa)
   
 
      0.696
JQMD01000002_gene1589
annotation not available (390 aa)
   
          0.693
JQMD01000002_gene2084
annotation not available (1876 aa)
 
 
 
  0.682
JQMD01000002_gene1613
annotation not available (384 aa)
   
          0.669
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
Server load: low (12%) [HD]