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JQMD01000002_gene1744 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1744" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1744annotation not available (348 aa)    
Predicted Functional Partners:
JQMD01000002_gene1747
annotation not available (457 aa)
 
          0.874
JQMD01000002_gene1819
annotation not available (458 aa)
   
          0.769
JQMD01000002_gene1745
annotation not available (701 aa)
 
          0.758
JQMD01000002_gene1749
annotation not available (472 aa)
 
          0.738
JQMD01000002_gene1746
annotation not available (442 aa)
 
          0.735
JQMD01000002_gene1833
annotation not available (392 aa)
   
          0.604
JQMD01000002_gene1381
annotation not available (398 aa)
   
          0.599
JQMD01000002_gene1711
annotation not available (383 aa)
   
          0.578
JQMD01000002_gene1821
annotation not available (471 aa)
   
          0.537
JQMD01000002_gene1818
annotation not available (426 aa)
   
          0.506
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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