STRINGSTRING
JQMD01000002_gene1778 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1778" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1778annotation not available (570 aa)    
Predicted Functional Partners:
JQMD01000002_gene1777
annotation not available (104 aa)
 
          0.866
JQMD01000002_gene1729
annotation not available (911 aa)
 
          0.748
JQMD01000002_gene1783
annotation not available (560 aa)
 
          0.742
JQMD01000002_gene1793
annotation not available (988 aa)
 
        0.736
JQMD01000002_gene1830
annotation not available (904 aa)
 
          0.728
JQMD01000002_gene1849
annotation not available (726 aa)
 
        0.728
JQMD01000002_gene1921
annotation not available (517 aa)
     
      0.720
JQMD01000002_gene1776
annotation not available (496 aa)
              0.647
JQMD01000002_gene3064
annotation not available (447 aa)
   
    0.639
JQMD01000002_gene1791
annotation not available (475 aa)
 
          0.590
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
Server load: low (8%) [HD]