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JQMD01000002_gene1783 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1783" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1783annotation not available (560 aa)    
Predicted Functional Partners:
JQMD01000002_gene1781
annotation not available (54 aa)
 
          0.795
JQMD01000002_gene1778
annotation not available (570 aa)
 
          0.742
JQMD01000002_gene1921
annotation not available (517 aa)
     
      0.720
JQMD01000002_gene1849
annotation not available (726 aa)
   
        0.699
JQMD01000002_gene3064
annotation not available (447 aa)
   
    0.639
JQMD01000002_gene169
annotation not available (318 aa)
 
          0.601
JQMD01000002_gene60
annotation not available (681 aa)
 
          0.544
JQMD01000002_gene1793
annotation not available (988 aa)
 
        0.543
JQMD01000002_gene63
annotation not available (680 aa)
 
          0.512
JQMD01000002_gene1782
annotation not available (39 aa)
              0.509
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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