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JQMD01000002_gene1848 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1848" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1848annotation not available (243 aa)    
Predicted Functional Partners:
JQMD01000002_gene1847
annotation not available (321 aa)
              0.845
JQMD01000002_gene31
annotation not available (304 aa)
   
          0.750
JQMD01000002_gene1402
annotation not available (2042 aa)
 
   
    0.749
JQMD01000002_gene432
annotation not available (1010 aa)
 
   
 
0.693
JQMD01000002_gene1846
annotation not available (179 aa)
              0.663
JQMD01000002_gene1942
annotation not available (457 aa)
 
          0.652
JQMD01000002_gene1946
annotation not available (302 aa)
 
          0.619
JQMD01000002_gene1845
annotation not available (410 aa)
              0.594
JQMD01000002_gene1943
annotation not available (397 aa)
   
          0.551
JQMD01000002_gene1849
annotation not available (726 aa)
              0.539
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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