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JQMD01000002_gene1860 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1860" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1860annotation not available (239 aa)    
Predicted Functional Partners:
JQMD01000002_gene1859
annotation not available (933 aa)
 
          0.865
JQMD01000002_gene1861
annotation not available (466 aa)
              0.845
JQMD01000002_gene1858
annotation not available (1112 aa)
 
          0.792
JQMD01000002_gene1862
annotation not available (531 aa)
 
          0.761
JQMD01000002_gene1856
annotation not available (904 aa)
 
          0.743
JQMD01000002_gene1857
annotation not available (627 aa)
 
          0.690
JQMD01000002_gene1680
annotation not available (504 aa)
 
   
  0.678
JQMD01000002_gene256
annotation not available (380 aa)
   
          0.665
JQMD01000002_gene1863
annotation not available (483 aa)
 
          0.639
JQMD01000002_gene2085
annotation not available (1484 aa)
       
    0.605
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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