STRINGSTRING
JQMD01000002_gene1872 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1872" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1872annotation not available (294 aa)    
Predicted Functional Partners:
JQMD01000002_gene345
annotation not available (494 aa)
       
    0.954
JQMD01000002_gene1873
annotation not available (464 aa)
 
          0.950
JQMD01000002_gene1871
annotation not available (505 aa)
 
          0.899
JQMD01000002_gene1870
annotation not available (926 aa)
 
          0.895
JQMD01000002_gene2399
annotation not available (463 aa)
 
          0.737
JQMD01000002_gene2396
annotation not available (908 aa)
 
          0.691
JQMD01000002_gene2574
annotation not available (477 aa)
   
          0.689
JQMD01000002_gene2397
annotation not available (503 aa)
 
          0.620
JQMD01000002_gene2576
annotation not available (777 aa)
   
          0.585
JQMD01000002_gene343
annotation not available (673 aa)
   
          0.559
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
Server load: low (13%) [HD]